Showing : whole exome sequence • reset
3
votes
5
replies
2.1k
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Include and implement a new reference genome option in the R package BSgenome for downstream variant calling analysis
bsgenome variant calling whole exome sequence gencode reference genome
updated 6.2 years ago by 16k • written 6.2 years ago by ▴ 830
0
votes
1
reply
1.2k
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Whole exomes: number of genes, polymorphism
whole exome sequence R bioconductor exome
7.7 years ago bioinf ▴ 10
3
votes
6
replies
1.9k
views
Whole exome: BAM statistics and other relevant information
rsamtools whole exome sequence bam exome R
7.8 years ago bioinf ▴ 10
0
votes
0
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844
views
cn.mops for paired whole exome data
whole exome sequence
8.0 years ago Haiying.Kong ▴ 110
4 results • Page 1 of 1
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Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Comment: Problem at champ.load by icecreamlover • 0
Hello! Were you able to figure this out? I am running into the same error!
Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0
Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0
Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0
Thank you!
Votes
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
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